WormBase Tree Display for Variation: WBVar00231738
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| WBVar00231738 | Name | Public_name | WBVar00231738 | ||
|---|---|---|---|---|---|
| Other_name | pas43514 | ||||
| cewivar00099802 | |||||
| Y51H1A.2b.1:c.1704+1436T>A | |||||
| Y51H1A.2a.1:c.1734+1436T>A | |||||
| HGVSg | CHROMOSOME_II:g.13861284A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y51H1A | |
| Flanking_sequences | ggcttcaaggaatacaattgagagaaaatgcggcaaaagtctccgagtactatctatgccattacaacaatcagcttatcatgccatctcgtcttatcgaacaccacggctgcatctcattgtcatgtgaatgatgaaaaatgagttgcgagttaaaaagtgtgattgttgtctggctggagttgggtggaggtgaagtgaacacggaagtttggatggaaggacttttaatccgcatattccatcgatcaggggagatgtcctgaacggcgcaaagtccgaaacaggatttctgatcga | tttttgcaggaattccggattccatgtagctcagggagcgatttgccaaattgccaattttcgggaaaacgtcgctaagagtacaaaccgaactaccgaaatatggaaatttccaaaagggaaaaaaaagattccgaattgccaaagccaataggtgtttagaaaaagacttgacttcttgaaaaaccgaaaattcgtaaaattgtggaacaattgccgagttgtgttgccaaaagccggcaatttcgaaaattgaagttgccggaattttgccgaaagccagttatttctagttgctca | |||
| Mapping_target | Y51H1A | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (21) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01441937 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00013093 | |||
| Transcript | Y51H1A.2b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51H1A.2b.1:c.1704+1436T>A | ||||
| Intron_number | 7/10 | ||||
| Y51H1A.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51H1A.2a.1:c.1734+1436T>A | ||||
| Intron_number | 8/12 | ||||
| Method | WGS_Pasadena_Quinlan |
