WormBase Tree Display for Variation: WBVar00231594
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WBVar00231594 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00231594 | |||
Other_name | pas43370 | ||||
cewivar00099392 | |||||
R06B9.6.1:c.-12T>C | |||||
HGVSg | CHROMOSOME_II:g.13741740T>C | ||||
Sequence_details | SMap | S_parent | Sequence | R06B9 | |
Flanking_sequences | ttctctcattcttcctatcctatttcactactattttattgcccacgatttatttcattttagttcagtccgtcttctcctcgtgtttccctgttgaagagttgcgagatttttgcttcgaaaaatccgaaaaacgagatttttttggctaaacatcgcccgaccaatcagcgattcgccctcccacttttccattaatcagcagagctcgaagatgctgattggctgaaaagtgggcggtgctaatcgctgattggtcagtcagttttcattggttttcctcgaatttcgtgtaaaatt | cagaaccaatcatggcgggcggagccgtcatcgagaatctgagcaatcggaagcttttcgtcattttcgcgggtcttttggtcattcaaattatgttcttcctgattggtgcctggtatggtgagttttccgggaaataatcgataaataagcttgggcttaggcttaggctcagcttttggcttaggcttaggtttggcttatactttggcttaggcttaggcttagatgtaggcctaggctcaggcttaggcctaggttgaggcttaggcttaggctcaggcctaggctgaggattag | |||
Mapping_target | R06B9 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (35) | |||||
Laboratory | AX | ||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01251220 | |||
WBVar01317895 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003246 | |||
Transcript | R06B9.6.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R06B9.6.1:c.-12T>C | ||||
cDNA_position | 3 | ||||
Exon_number | 1/11 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |