WormBase Tree Display for Variation: WBVar00229391
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| WBVar00229391 | Name | Public_name | WBVar00229391 | ||
|---|---|---|---|---|---|
| Other_name | pas41167 | ||||
| cewivar00094941 | |||||
| F40F8.7.1:c.673+7C>A | |||||
| HGVSg | CHROMOSOME_II:g.11151549G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_II | |
| Flanking_sequences | aatatttatcaaattattcccagaaaaacgggagaatcgaatcgaaagtgagcgttttccttgcgagagttatcagcgaatggtttgcacgaaaatggaatggaattcggtttttttcgaggaaaagagcagagactggtgacgtactactgtactttgaagttttctaaattactggaatctcttgaaagttcaataagaagatcttctactatgtaaaactgctaagcagatttttccaaattttcttaaatttttccaagaattcatctttataatccaagagatttgatgtacttc | tcataccttggtcgatactctctggaagtggaattccgtgccgatagttcttgtggaaatgaatgtatcgagcctcgcgagttgtgaactgacagttgggaacgttgcatctgaaatgatagatcctttaatattatctgttgtaactttacagtaagcttgcagccgacagtagaaaagcgccgatcaatgtcggctgcttgttgctctgcacctttaaatgggaggcataactttccttccctcacttacttgattggaggattcctatggtagatggtaacgtggtaagacaccgag | |||
| Mapping_target | CHROMOSOME_II | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004096 | |||
| Transcript | F40F8.7.1 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F40F8.7.1:c.673+7C>A | ||||
| Intron_number | 5/7 | ||||
| Method | WGS_Pasadena_Quinlan |
