WormBase Tree Display for Variation: WBVar00228586
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| WBVar00228586 | Name | Public_name | WBVar00228586 | ||
|---|---|---|---|---|---|
| Other_name | pas40362 | ||||
| cewivar00094567 | |||||
| CE35827:p.Asn829Asp | |||||
| C09G5.6.1:c.2485A>G | |||||
| C09G5.2a.1:c.797+561T>C | |||||
| HGVSg | CHROMOSOME_II:g.10711589A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C09G5 | |
| Flanking_sequences | gatgctccatcaagaagtcgcccgctgaagaaggttgagatcatcagacacccagaaagaggatacgatcgtcgtcagccatcttatgaggattcgaagccaagacaagaggagccaagacgatatgaaacggaagctgagccacgctatgaagaagttccacggaaagagacacatcctccaggatttggaagaccaaaatctgaggaaaatccaagggaaacaggaagaacttactcagaagaagcaatgccacctgtgcaacaaactgagaaatataatggagataaaagaaagaag | atcagccagagtatgaggatatttcaaaaccagaagaggataaagaaagagcaatggtaagtgatattgtgatgattatttctataaaagaactataaattgcaggaaaaacaccacaagaagcctaataagttccaagaaaaacaatgggaagagcatagaaagagccaggaactcaggaattcgagagagcatggaggacaagttccaggtagaattgttatgcggaaattatcattaaattaaattcaattgcagttgaaacttccgtaccaatgcaacaagtaaaacctgaatcct | |||
| Mapping_target | C09G5 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00007488 | |||
| WBGene00000251 | |||||
| Transcript | C09G5.2a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09G5.2a.1:c.797+561T>C | ||||
| Intron_number | 6/10 | ||||
| C09G5.6.1 (12) | |||||
| Method | WGS_Pasadena_Quinlan |
