WormBase Tree Display for Variation: WBVar00228586
expand all nodes | collapse all nodes | view schema
WBVar00228586 | Name | Public_name | WBVar00228586 | ||
---|---|---|---|---|---|
Other_name | pas40362 | ||||
cewivar00094567 | |||||
CE35827:p.Asn829Asp | |||||
C09G5.6.1:c.2485A>G | |||||
C09G5.2a.1:c.797+561T>C | |||||
HGVSg | CHROMOSOME_II:g.10711589A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C09G5 | |
Flanking_sequences | gatgctccatcaagaagtcgcccgctgaagaaggttgagatcatcagacacccagaaagaggatacgatcgtcgtcagccatcttatgaggattcgaagccaagacaagaggagccaagacgatatgaaacggaagctgagccacgctatgaagaagttccacggaaagagacacatcctccaggatttggaagaccaaaatctgaggaaaatccaagggaaacaggaagaacttactcagaagaagcaatgccacctgtgcaacaaactgagaaatataatggagataaaagaaagaag | atcagccagagtatgaggatatttcaaaaccagaagaggataaagaaagagcaatggtaagtgatattgtgatgattatttctataaaagaactataaattgcaggaaaaacaccacaagaagcctaataagttccaagaaaaacaatgggaagagcatagaaagagccaggaactcaggaattcgagagagcatggaggacaagttccaggtagaattgttatgcggaaattatcattaaattaaattcaattgcagttgaaacttccgtaccaatgcaacaagtaaaacctgaatcct | |||
Mapping_target | C09G5 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00007488 | |||
WBGene00000251 | |||||
Transcript | C09G5.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C09G5.2a.1:c.797+561T>C | ||||
Intron_number | 6/10 | ||||
C09G5.6.1 (12) | |||||
Method | WGS_Pasadena_Quinlan |