WormBase Tree Display for Variation: WBVar00228558
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WBVar00228558 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00228558 | |||
Other_name | pas40334 | ||||
cewivar00094522 | |||||
M28.6.1:c.1111-176A>T | |||||
HGVSg | CHROMOSOME_II:g.10652940T>A | ||||
Sequence_details | SMap | S_parent | Sequence | M28 | |
Flanking_sequences | gtcctgcacaagtcgtagagtcccgttttcaacccatttgtgacgtaggcaattgtcactcgattcttgagatctgtgatgaccatttggcatccgtgcccggtatgtccgaagccgaattgagtctgaaaatatggcgaattatgaaagaaaaatattaaaaaaattcactgaaaattaaataaaaaaacgctcctaacattttgcaggttctttagctaaatttagggttttaaatattttttctatgcattttcattttttgaatgaattcgaaattaatggtttttcaacaatttc | cctgttttttcgttttctgttcaccacctgggctctttttttttggtcctttgctaattttttgggggtttcaaaatttttttttttttgcttttttcggcagttgtaattttattacaaaaatggatttttcagtcttttttaatgcaaaaattaatttttggctgtttatgttttatgtttatttatttaatttatttttaattttgttaatttttgttatttttgttaatttttgttaatttttgttaatttatgtttatttagcaaaaaggtacttttcgggtttttttgagaaaa | |||
Mapping_target | M28 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (26) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01439588 | |||
Status | Live | ||||
Affects | Gene | WBGene00010897 | |||
Transcript | M28.6.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | M28.6.1:c.1111-176A>T | ||||
Intron_number | 8/9 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |