WormBase Tree Display for Variation: WBVar00226956
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| WBVar00226956 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00226956 | |||
| Other_name | pas38732 | ||||
| cewivar00050128 | |||||
| CE29865:p.Ala16= | |||||
| Y39B6A.24.1:c.48G>A | |||||
| HGVSg | CHROMOSOME_V:g.19037271C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y39B6A | |
| Flanking_sequences | ggtatcaaacttctgtcgggtgtagttggatccgatccatccgttacaaaacatgttatcacaggatgcatcgatgacccacatgttggcagatccagtgtcaaggaccaggctgacaggttgcggaggggtccccacagtgaagttaccgaggtatacttcatcggaatagtcggatattggttgggatattgtgttaagtcgggcagcatgctgagtaatcaggaattcttggtattttccggctcggatgagcttggcacggagggagccggtgcttttggtggggagctggaagac | gctgcagagcagaaaggagctaggaaaagtaggaagatgagatgcatatctggaagaaagataatcgatgcaccatgttgaaaaaaacagagttttggcgggaaattcaaattttctgagaaaaaaatttttgcgggaaattccaattctggaaaaaaaattttggcgggaaattcgaattttctgagaaaaattttttggcggtaaattgaaattttttgagaaaaattttttggcgggaaattcaagttttctgggaaacattttttggcgggaaattcaaattttccaaaaaaaagt | |||
| Mapping_target | Y39B6A | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (120) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01465792 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00012683 | |||
| Transcript | Y39B6A.24.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y39B6A.24.1:c.48G>A | ||||
| HGVSp | CE29865:p.Ala16= | ||||
| cDNA_position | 52 | ||||
| CDS_position | 48 | ||||
| Protein_position | 16 | ||||
| Exon_number | 2/4 | ||||
| Codon_change | gcG/gcA | ||||
| Amino_acid_change | A | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
