WormBase Tree Display for Variation: WBVar00226547
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| WBVar00226547 | Name | Public_name | WBVar00226547 | ||
|---|---|---|---|---|---|
| Other_name | pas38323 | ||||
| cewivar00092929 | |||||
| T21B10.2c.1:c.92+195G>T | |||||
| T21B10.2a.2:c.-2+195G>T | |||||
| HGVSg | CHROMOSOME_II:g.8931289G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T21B10 | |
| Flanking_sequences | gtttttgatttaaaatgtttgttccattcacctcggcagctcactcgctcacttcgctcattcgaggtggcgggcagccttcgaaaagcaatctgtctggacaaaggttttggttatctctttttctttattttccgccagttgatttcatgctcccgcgacttccacacgcaatctgcaaaattttggctgctgaatcagggtaatggggtctgccgtgccttttttccaaaacgttgactgatgtttacttttcttttatgtttcattttgacttgttcaatggttttgaacaatagt | tgtgcaaactaacgtttttctttaaattcaacacgcaagctttgaggtgttttagttagaaagaaaatagttgtgtttctcttcaaaaataagttttttccgaaatgttttgcaaattttccgaatcaacaatttcttctcatatcagaccttatcacttcttctcacttctaaaactgaccactgaacataaaaaacatttggtaactcgcttctcaaatccaatctgaagtgcatgctttgccaatctgaaacttcgtgtaagtcacgtatttaggcgaaaggcagccgctcaagtcg | |||
| Mapping_target | T21B10 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00011884 | |||
| Transcript | T21B10.2a.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21B10.2a.2:c.-2+195G>T | ||||
| Intron_number | 1/5 | ||||
| T21B10.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21B10.2c.1:c.92+195G>T | ||||
| Intron_number | 1/3 | ||||
| Method | WGS_Pasadena_Quinlan |
