WormBase Tree Display for Variation: WBVar00226145
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| WBVar00226145 | Name | Public_name | WBVar00226145 | ||
|---|---|---|---|---|---|
| Other_name | pas37921 | ||||
| cewivar00092400 | |||||
| M110.4c.1:c.*580G>T | |||||
| M110.4b.1:c.*580G>T | |||||
| M110.4a.1:c.*580G>T | |||||
| M110.4d.1:c.*580G>T | |||||
| HGVSg | CHROMOSOME_II:g.8221822G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | M110 | |
| Flanking_sequences | agtaaatcaattttcagacattcagatcatttttcctgcaaacttccgctcattctacaactcgtctcgaaacgtgaagattctcttcatttttcgtttcgagacgcagaaatcaactcgttatagcccctttcccacccaccttacccttttcttctgatgatcactaaaaatatcacgttttcctccaaatcattaaatatttatatcctcatttggattcccgtttcgtttatttgctcccagttcccatttctttcattcgtttttctatttgaataaccctttcatagtctcctt | tttattgtttctaaattagctgttggttttttattggtttctcccttcatatttccataccagttggtcccgagaacatttcttgctatgcttgttttcgtgcttaaagggtcttttctaagagacggtcgaaaagtcgctgaattttttcggagtgctggaatttcgttgaattgcatcgaatttatcgtaaaacgaagacttttgactagctcttagcttcatttcttttccaaatttcctaattgtgtgtaagtcagtgccttcggtctgattcctggatcttctagaaattgtgac | |||
| Mapping_target | M110 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (12) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00002066 | |||
| Transcript | M110.4c.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | M110.4c.1:c.*580G>T | ||||
| cDNA_position | 4095 | ||||
| Exon_number | 11/11 | ||||
| M110.4b.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | M110.4b.1:c.*580G>T | ||||
| cDNA_position | 4070 | ||||
| Exon_number | 11/11 | ||||
| M110.4d.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | M110.4d.1:c.*580G>T | ||||
| cDNA_position | 4089 | ||||
| Exon_number | 11/11 | ||||
| M110.4a.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | M110.4a.1:c.*580G>T | ||||
| cDNA_position | 4074 | ||||
| Exon_number | 11/11 | ||||
| Method | WGS_Pasadena_Quinlan |
