WormBase Tree Display for Variation: WBVar00226085
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| WBVar00226085 | Name | Public_name | WBVar00226085 | ||
|---|---|---|---|---|---|
| Other_name | pas37861 | ||||
| cewivar00092321 | |||||
| CE37882:p.Ala236= | |||||
| C41C4.10b.1:c.414A>G | |||||
| CE51493:p.Ala138= | |||||
| C41C4.10a.1:c.708A>G | |||||
| HGVSg | CHROMOSOME_II:g.8102888T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C41C4 | |
| Flanking_sequences | agcaaacaagatgtatggtgcaaaataattagataataactcaaaggtgtgcgaggaaattaccgagatcaccgagcatggataccatttgttttgtttttttttaaataaaatatcataaagatattcattaagcaaaaatagaacgatctactttgtactgacattgtactgctcggcgaatttgcggccctccccagttactaacctttccaggtacggcataatacacggaggcatcaaaagaagtggaactggaaggaatgctcgaaccattgttgtatcagttactgcttgttt | gcagctacttttgatactccaacaacttttcctgtatccttctcgtacacttgaattccagtttccaactcattccagcgcatgcagatgacgttgagtgacgatgcaagtgacgtggcaggaagtggaacaaatctctgaaaagtaagcaattaggtaatatttttttggaagttagatgaaactctaggttgatgtacaaacatggtcatattcatatgcaatatcttgttaaactcgctaaattgcgtatcttctaactggcgtatcttgaaaaatacacgtctagaaaacaaattt | |||
| Mapping_target | C41C4 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (69) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01242031 | |||
| WBVar01438697 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00044049 | |||
| Transcript | C41C4.10b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C41C4.10b.1:c.414A>G | ||||
| HGVSp | CE51493:p.Ala138= | ||||
| cDNA_position | 414 | ||||
| CDS_position | 414 | ||||
| Protein_position | 138 | ||||
| Exon_number | 2/4 | ||||
| Codon_change | gcA/gcG | ||||
| Amino_acid_change | A | ||||
| C41C4.10a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C41C4.10a.1:c.708A>G | ||||
| HGVSp | CE37882:p.Ala236= | ||||
| cDNA_position | 709 | ||||
| CDS_position | 708 | ||||
| Protein_position | 236 | ||||
| Exon_number | 4/7 | ||||
| Codon_change | gcA/gcG | ||||
| Amino_acid_change | A | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
