WormBase Tree Display for Variation: WBVar00225043
expand all nodes | collapse all nodes | view schema
| WBVar00225043 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00225043 | |||
| Other_name | pas36819 | ||||
| cewivar00090891 | |||||
| CE31791:p.Lys231= | |||||
| F18C5.2.1:c.693G>A | |||||
| HGVSg | CHROMOSOME_II:g.6555772G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F18C5 | |
| Flanking_sequences | aaagaacaaatgtgatgattcatgggatgatggaatagacgaagaagatgtctcaaaaagatcagaagacacgttaaatgattcatttgttgatcctgaattcatggattctgttctagataatcaattaacgatcaaaggcaaaaagcaatttctcgatgatggagagtttttcacagaccggaatgttcctcagattgatgaagctacaaaaatgaagtgggcatcaatgacgtcacctcctcaagaagctttgaacgcattgaacgaattcttcggtcataaaggattccgagaaaa | cagtgggatgttgtcagaaatgttttgggaggaaaagaccaatttgttcttatgtccactggttatggtaaaagtgtatgttatcagctaccatcacttcttctcaattcgatgactgtcgtggtatctccattaatttcattgatgaatgatcaagtaactacattggtttctaaaggtattgatgcagtgaaactagatggacattctacacaaattgaatgggatcaagttgcgaataatatgcaccgaattaggtaattgacaattggtggttcaattctttatcaaatacttttc | |||
| Mapping_target | F18C5 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (48) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01438208 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006944 | |||
| Transcript | F18C5.2.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F18C5.2.1:c.693G>A | ||||
| HGVSp | CE31791:p.Lys231= | ||||
| cDNA_position | 693 | ||||
| CDS_position | 693 | ||||
| Protein_position | 231 | ||||
| Exon_number | 3/17 | ||||
| Codon_change | aaG/aaA | ||||
| Amino_acid_change | K | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
