WormBase Tree Display for Variation: WBVar00225038
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| WBVar00225038 | Name | Public_name | WBVar00225038 | ||
|---|---|---|---|---|---|
| Other_name | pas36814 | ||||
| cewivar00090754 | |||||
| CE02846:p.Ile379= | |||||
| R12C12.1a.1:c.1137T>C | |||||
| R12C12.1b.1:c.945T>C | |||||
| CE51882:p.Ile315= | |||||
| HGVSg | CHROMOSOME_II:g.6052087T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | R12C12 | |
| Flanking_sequences | tgtcgctaagcatgatgcgaagaatgcattgggaagaaatattccaggaagaatcattggagttactaagtaagtggtaaccaatttctgggatcaacctatcaccaagacttcacatttaaacttttcttttttcagggatgcaaatggaaatcgtgctcttcgcctggctcttcaaacccgtgagcaacacattcgtcgtgataaggcaaccagtaacatttgtactgctcaagctcttcttgctaatatgtcagctatgtacgcagtctatcatggtccacaaagactcactgaaat | gccagaggagttcacaaatcaactgcatatcttgcttaccgtaagttactatgtaagttactatattcattaaatctttaatttagatcttcgaaatgctggtcacgaaattgtacacaaggactactttgatactttgaaaatccgtctgaaggataaagccgctcttgaagaaacgaaaaagagagccgaggaaatgaagatgaacttccgttattatgaagatggagatatcggagtttcattggatgagactgttaaatctgaagatcttatggatatcatctacacattgaatgg | |||
| Mapping_target | R12C12 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020022 | |||
| Transcript | R12C12.1a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | R12C12.1a.1:c.1137T>C | ||||
| HGVSp | CE02846:p.Ile379= | ||||
| cDNA_position | 1157 | ||||
| CDS_position | 1137 | ||||
| Protein_position | 379 | ||||
| Exon_number | 5/13 | ||||
| Codon_change | atT/atC | ||||
| Amino_acid_change | I | ||||
| R12C12.1b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | R12C12.1b.1:c.945T>C | ||||
| HGVSp | CE51882:p.Ile315= | ||||
| cDNA_position | 945 | ||||
| CDS_position | 945 | ||||
| Protein_position | 315 | ||||
| Exon_number | 3/10 | ||||
| Codon_change | atT/atC | ||||
| Amino_acid_change | I | ||||
| Method | WGS_Pasadena_Quinlan |
