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WormBase Tree Display for Variation: WBVar00222551

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Name Class

WBVar00222551EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00222551
Other_namepas34327
cewivar00089561
K07D4.7d.1:c.62-513T>C
K07D4.7c.1:c.1043-513T>C
K07D4.7a.1:c.1463-513T>C
HGVSgCHROMOSOME_II:g.4011937T>C
Sequence_detailsSMapS_parentSequenceK07D4
Flanking_sequencesctgttctccgatcatttgactaaatttctgttatcttcaaattcttatcacttcaaaaaaccagttttgataatatgtttctttttatctatttttccatcaatactaattgttgtcgtcagggtcatcaggtggaaatttgaaatgcccatgacgctatgctactagtaatttttaattttatctgtaatttttttccctaaggtaggctctttttttgcaattttcattaaaaaatgaccgaaacactataattgaattagttttatattgactcaggcttcgcaaatatttttttcaaacttcacagtttgacctcttattttacgaattcgctacgcgctgaaacaatattgactctaatttttgtatagtacaaattgtgtggcctattattctatgaaagcctgccgctgtaccaggcaaacacgagatccaggtggcctaaatctgttcttgtatagaagatatgtctgttagatttcactttcattttgagcttagccgccgccaatgttttcgacacttgcaagatgtgtgatgaaaaaacgatttactggtaaattttttcagccaaaagcttgagcctagcctagcgcg
Mapping_targetK07D4
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (34)
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01437283
StatusLive
AffectsGeneWBGene00019487
TranscriptK07D4.7d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK07D4.7d.1:c.62-513T>C
Intron_number1/5
K07D4.7a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK07D4.7a.1:c.1463-513T>C
Intron_number7/12
K07D4.7c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK07D4.7c.1:c.1043-513T>C
Intron_number4/8
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan