WormBase Tree Display for Variation: WBVar00222514
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| WBVar00222514 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00222514 | |||
| Other_name | pas34290 | ||||
| cewivar00030249 | |||||
| K08E3.6.1:c.1083+48T>G | |||||
| K08E3.13:n.58A>C | |||||
| K08E3.11:n.5T>G | |||||
| HGVSg | CHROMOSOME_III:g.13769949A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | K08E3 | |
| Flanking_sequences | ccacgtaatgcggatttcggcgtcatcatcgtcttggggcgtggtatgcacgggagatgaagtttgttgcagcaactacgatggacaacctggtgacagtctctgcatttcattgatgtggcgagcttcagggctgtagcacatttgtcgcattttcgcatctgaaaatcaaaaaggtattaaaacagtgtggcaattcatgtttaacagaaaaaataggaattctttgttcagaaatagatgtttgcaacatggggtccgagacggacgcgcctcttcatgattagcatgattttcatc | ctacagagctcactttaaagaaatttgttagcattttttacacgtaccgctttgattcctgcctctataaacgtgtgtggtctcattgcgatgtcacgagttgttccattagtccacgccggcgtgccacgtttcagggttcggatatcaagtgtgcttttggtgagaatggcggacgacatgccgaggccgatgttatttgtggtttgtcctggtgtttgatcgcatgatggaatacttccacagctcaagctcctgcgggtgagctggcggtgaagtgagacacgtggcgggtcctgg | |||
| Mapping_target | K08E3 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (93) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01449999 | |||
| WBVar01274462 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00197401 | |||
| WBGene00000875 | |||||
| WBGene00045172 | |||||
| Transcript | K08E3.6.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K08E3.6.1:c.1083+48T>G | ||||
| Intron_number | 5/7 | ||||
| K08E3.13 | VEP_consequence | non_coding_transcript_exon_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K08E3.13:n.58A>C | ||||
| cDNA_position | 58 | ||||
| Exon_number | 1/1 | ||||
| K08E3.11 | VEP_consequence | non_coding_transcript_exon_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K08E3.11:n.5T>G | ||||
| cDNA_position | 5 | ||||
| Exon_number | 1/1 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
