WormBase Tree Display for Variation: WBVar00219494
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| WBVar00219494 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00219494 | |||
| Other_name | pas31270 | ||||
| cewivar00111742 | |||||
| Y49E10.19.2:c.-25T>G | |||||
| HGVSg | CHROMOSOME_III:g.12453257A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | Y49E10 | |
| Flanking_sequences | ttgaggagcttccgaagacttttgttggagatgcaactgaaaatcaaacatattaattaatatatttatatttctgtattcttaaaaaccccaaaatataccttcttgcttcacagatgtaatttttgaggtcactggcccattctcctttgccacctctccttcgcctgacatttcggcttgccgaactcgtatgcgttccattagagaatcgaattgatcccccattgtatttacagtgtagttctgcaagaaaacaatgtttccaagaaaatctcatcaaaacttgcgaacagtttc | acgaattcgtaaaacgacgcacttttcgcagcttttcttgtagaaaataattaaaattgactaatacgcgtttatatcgggcaaaattcgtggaaaacgtgtcaaaaaacaggaaaaatgtgaaaattcacgtcaaaaaatcgaaaaacgtttaaaatcgagttgcaaaatttgaatacattgttttggcggcaaccaggtctcgacgcgtggtgggacccacgcgtgaaaaaaaacgcgcctttaatcccgcgcatctgcgtctcttcttttcgcgtgctctctctctctctccctctc | |||
| Mapping_target | Y49E10 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (86) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01449380 | |||
| WBVar01272893 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00013038 | |||
| Transcript | Y49E10.19.2 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49E10.19.2:c.-25T>G | ||||
| cDNA_position | 119 | ||||
| Exon_number | 1/11 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
