WormBase Tree Display for Variation: WBVar00217996
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WBVar00217996 | Name | Public_name | WBVar00217996 | ||
---|---|---|---|---|---|
Other_name | pas29772 | ||||
cewivar00116816 | |||||
CE18901:p.Lys119= | |||||
R03E1.1.1:c.357G>A | |||||
HGVSg | CHROMOSOME_X:g.14168877C>T | ||||
Sequence_details | SMap | S_parent | Sequence | R03E1 | |
Flanking_sequences | tgtttcaaaaatcaaatttgtagtaaaaggaacagagaataaaaacgctcattttaaacaaaaaatgatatttcaaccataaacattcccttgattttatgcagtttgctcctccataaacatccgggcaaactttaaaaaaaatgcaattctcgcctgactcaccacggtctcgtttttcacaatcattttatgatgccaagaatgaagactaggagcgtcagaaactgtgctcattgtttcatcatgctcatagtcagtttgcgcggtgggtccaacaagttgtcggttgccaaattc | ttgttcatccggtgccggagggagataagtctatcgcggtgagaagagtcacgaattgatgaagttgatgtggcgggaaactgaaaaaaacatttagagttaattaatacatagtttcattcaaattttgttcatatttcaccatactaacaacaaacgttgtgatactaagacaatataccttcaaaaagcaagagtggttatatgtgtacatacgtttagtttttggcaagaaatgttttatttttaacgacatagacttgtcaccaagaatttttgaaaaagctttagagctatttt | |||
Mapping_target | R03E1 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (24) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006369 | |||
Transcript | R03E1.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | R03E1.1.1:c.357G>A | ||||
HGVSp | CE18901:p.Lys119= | ||||
cDNA_position | 380 | ||||
CDS_position | 357 | ||||
Protein_position | 119 | ||||
Exon_number | 4/12 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
Method | WGS_Pasadena_Quinlan |