WormBase Tree Display for Variation: WBVar00216933
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| WBVar00216933 | Name | Public_name | WBVar00216933 | ||
|---|---|---|---|---|---|
| Other_name | pas28709 | ||||
| cewivar00115554 | |||||
| C53C7.5a.1:n.754C>T | |||||
| C53C7.5b.1:n.754C>T | |||||
| HGVSg | CHROMOSOME_X:g.13043624C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C53C7 | |
| Flanking_sequences | atgtacatattgatcacattgcggtgagtctttattttgttttacgtacttgcaaatcctgtatactttcagaaagttgatttataaataaccaaaaaaaatttaaaaacccaaaaaaattaatcccatgatgttctaccgtcgagaaagcagtgagcctgcctcgtgccaataaaagagaggtactacccaaccgtgacgccaatggtaacgacatttactatcaaaattgatagtagccttaatttaaaaatgtcaatttaaaatttcagagtgcaacgcctcctcggcacctacttc | ggtaaaagagagcccgaaatatattaataaacgtttgttaatcacatttttagttttcactcaagattaataaattccaggatggattccatcaactgactttacaagaaagccatggaacatggtcttggcccttattgaactatatgtgagtggagatcacttgggaaaattttaaaagctgatatatctaagaaatttcagaaacagttcctaataacagcaagcacaagtgcctgaacaaagatttcaaagaagtaggctactgacaacaatttcctgataagatggattcattta | |||
| Mapping_target | C53C7 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (25) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00014294 | |||
| Pseudogene | C53C7.5a | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C53C7.5a.1:n.754C>T | ||||
| cDNA_position | 754 | ||||
| Exon_number | 10/22 | ||||
| C53C7.5b | VEP_consequence | non_coding_transcript_exon_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C53C7.5b.1:n.754C>T | ||||
| cDNA_position | 754 | ||||
| Exon_number | 10/22 | ||||
| Method | WGS_Pasadena_Quinlan |
