WormBase Tree Display for Variation: WBVar00215937
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| WBVar00215937 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00215937 | |||
| Other_name | pas27713 | ||||
| cewivar00074490 | |||||
| F28D9.1.1:c.259-64A>G | |||||
| HGVSg | CHROMOSOME_I:g.11180632T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F28D9 | |
| Flanking_sequences | ccgagccggaccagtgtaccgcccgttactcagggtcttgtagcgatttgtccagtcgttatcctcccgatcgtcgcccttctcatcacgatcatttgtcttcatctcggccatcttctgattgactagcgatgctggaattccgtcttctgatgcatttgcctcgatgagcagattccagaggtcgccgacaaattcccgggcgcgacgggcgttcaggaagcctgtgacgttgatctgaaagtaaattgagattattgaggcggttatgtggctacaaactacaaaaacagctgattt | ttgcgaatttgaaggtaaaaatttgaaattaaaagcgttttctcatgattttcaggttttttgatagaaaatttgctgtaattctgacattttacagtgattttttctgaaattaaaaaaagcttggttgaggctcagagactacaaactacaaagtctagtgagcctcaaccaagcaaatttattttaaaaatgaagttacttgcatgaaattttgccgattttcgtagtttttggtctctgaaagtcgatttttcggtcaaaaatctaatttttacggaaaattaattatctaaaaag | |||
| Mapping_target | F28D9 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01348584 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004706 | |||
| Transcript | F28D9.1.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28D9.1.1:c.259-64A>G | ||||
| Intron_number | 3/5 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
