WormBase Tree Display for Variation: WBVar00214979
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| WBVar00214979 | Name | Public_name | WBVar00214979 | ||
|---|---|---|---|---|---|
| Other_name | pas26755 | ||||
| cewivar00006700 | |||||
| CE41557:p.Ala613= | |||||
| F08D12.1.1:c.1839A>C | |||||
| HGVSg | CHROMOSOME_II:g.2793133A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F08D12 | |
| Flanking_sequences | ataccgtcaaaagaaggaggcaaagtcaccacaaactgctgaaattgctgctactcgaaagctgaaaatcgcgacgaagcgaaaacggaagattcgtctcccgaagaactacaattccgcagtgactccggatccagaacgatggcttccacgccaagaacgatcgacttacaagcgaaaacggaagaaccgagaacgcgaaattggccgtggaactcaaggatcttcgtctgcgaatccgaatgtcgaatatgtgacagcgtctccgaattcgccacgcccacttcctggtcccgtcgc | gaaggaccccgtcaacagcgtcccaatttccagaaacagaagaagaagaagaatgcgtcgaaattttaaattttttttgaaaaaaatttccttttttttctattactagtaataattattgccccctgagatttcctttccctgaaaaaattgcgaaaaaagtgaaaaaaaaattggagaaattttggcgatttttgaaaatttctgaaaaattgacaaaaatcgtgttttttgacgatttttcgataattttaacatttttagtcgaaaaaaaaaatgcattttttgtgtaaaattgac | |||
| Mapping_target | F08D12 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (158) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01233931 | |||
| WBVar01365141 | |||||
| WBVar01436686 | |||||
| WBVar01299852 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00017245 | |||
| Transcript | F08D12.1.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F08D12.1.1:c.1839A>C | ||||
| HGVSp | CE41557:p.Ala613= | ||||
| cDNA_position | 1840 | ||||
| CDS_position | 1839 | ||||
| Protein_position | 613 | ||||
| Exon_number | 9/10 | ||||
| Codon_change | gcA/gcC | ||||
| Amino_acid_change | A | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
