WormBase Tree Display for Variation: WBVar00214946
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| WBVar00214946 | Name | Public_name | WBVar00214946 | ||
|---|---|---|---|---|---|
| Other_name | pas26722 | ||||
| haw127309 | |||||
| cewivar00006635 | |||||
| F08D12.5b.1:n.169-4A>C | |||||
| F08D12.5a.1:n.261-4A>C | |||||
| HGVSg | CHROMOSOME_II:g.2776849A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F08D12 | |
| Flanking_sequences | aggataggtgttggttgcctcaacctgaaacggtgaaacgattcgtagttgcgctctactaagctttgactggctcaacaggtaaagcggtagcggcctgaaggatgccaaaaagcttaagttttgccgctcctgcttatctgtaacatagaacctacaagagactgattgtagcaaaagtttagccacttaccaagttcgcaaggtaaggtaagcaagctaagcagttcgatagtccgcgattatgataccttatagtcatggtcatagacttctggccatgttaaacaatgctcattt | cagagatccgtgcctaacaccgacctgagccagcctatcacttcatgcccagcttccacagtgacacttccaacctgtgaagttgggtggaagctgttcccacgctacgatacttatttgtgtctaacggtagatcatttcagtttttgaaaccttctcacaacccatattccagctaggcatcaatcgaaaggaacgtgacggatacttattacagtttgatcaaatttccagttatgttgcttgcagatgggatggatcgaagttcatagatggtatattaagtgggctggagagcga | |||
| Mapping_target | F08D12 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (31) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01299789 | |||
| WBVar01365062 | |||||
| WBVar01233869 | |||||
| WBVar00547174 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00043239 | |||
| Pseudogene | F08D12.5a | VEP_consequence | splice_region_variant,intron_variant,non_coding_transcript_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F08D12.5a.1:n.261-4A>C | ||||
| Intron_number | 2/6 | ||||
| F08D12.5b | VEP_consequence | splice_region_variant,intron_variant,non_coding_transcript_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F08D12.5b.1:n.169-4A>C | ||||
| Intron_number | 1/5 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
