WormBase Tree Display for Variation: WBVar00208891
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WBVar00208891 | Evidence | Paper_evidence | WBPaper00038208 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00208891 | ||||
Other_name | haw76167 | |||||
haw165837 | ||||||
cewivar00233048 | ||||||
CE19673:p.Met72Ile | ||||||
C04F5.9.1:c.216G>T | ||||||
HGVSg | CHROMOSOME_V:g.5117912C>A | |||||
Sequence_details | SMap | S_parent | Sequence | C04F5 | ||
Flanking_sequences | ctgcttcccgaagatcgtacaccaa | atttcctgaaaactttgagagaaat | ||||
Mapping_target | C04F5 | |||||
Type_of_mutation | Substitution | C | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
WBPerson4037 | ||||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar00585702 | ||||
Status | Live | |||||
Affects | Gene | WBGene00015451 | ||||
Transcript | C04F5.9.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.03 | deleterious | ||||
PolyPhen | 0.953 | possibly_damaging | ||||
HGVSc | C04F5.9.1:c.216G>T | |||||
HGVSp | CE19673:p.Met72Ile | |||||
cDNA_position | 269 | |||||
CDS_position | 216 | |||||
Protein_position | 72 | |||||
Exon_number | 4/7 | |||||
Codon_change | atG/atT | |||||
Amino_acid_change | M/I | |||||
Reference | WBPaper00038208 | |||||
Remark | [20081124 db] this Variation was previously named hw76167 | |||||
Method | WGS_Hawaiian_Waterston |