WormBase Tree Display for Variation: WBVar00193186
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WBVar00193186 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00193186 | |||
Other_name | haw60462 | ||||
haw155224 | |||||
cewivar00210151 | |||||
C48D1.5d.1:c.597+40G>A | |||||
C48D1.5e.1:c.543+40G>A | |||||
C48D1.5c.1:c.675+40G>A | |||||
C48D1.5f.1:c.465+40G>A | |||||
HGVSg | CHROMOSOME_IV:g.13228445G>A | ||||
Sequence_details | SMap | S_parent | Sequence | JC8 | |
Flanking_sequences | tcatggtatatgcgtctttaaaccc | gtctcgaaattttcttacaattaaa | |||
Mapping_target | JC8 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00575089 | |||
Status | Live | ||||
Affects | Gene | WBGene00008178 | |||
Transcript | C48D1.5e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C48D1.5e.1:c.543+40G>A | ||||
Intron_number | 4/4 | ||||
C48D1.5c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C48D1.5c.1:c.675+40G>A | ||||
Intron_number | 6/6 | ||||
C48D1.5f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C48D1.5f.1:c.465+40G>A | ||||
Intron_number | 3/3 | ||||
C48D1.5d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C48D1.5d.1:c.597+40G>A | ||||
Intron_number | 5/6 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw60462 | ||||
Method | WGS_Hawaiian_Waterston |