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WormBase Tree Display for Variation: WBVar00193186

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Name Class

WBVar00193186EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00193186
Other_namehaw60462
haw155224
cewivar00210151
C48D1.5d.1:c.597+40G>A
C48D1.5e.1:c.543+40G>A
C48D1.5c.1:c.675+40G>A
C48D1.5f.1:c.465+40G>A
HGVSgCHROMOSOME_IV:g.13228445G>A
Sequence_detailsSMapS_parentSequenceJC8
Flanking_sequencestcatggtatatgcgtctttaaacccgtctcgaaattttcttacaattaaa
Mapping_targetJC8
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00575089
StatusLive
AffectsGeneWBGene00008178
TranscriptC48D1.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5e.1:c.543+40G>A
Intron_number4/4
C48D1.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5c.1:c.675+40G>A
Intron_number6/6
C48D1.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5f.1:c.465+40G>A
Intron_number3/3
C48D1.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5d.1:c.597+40G>A
Intron_number5/6
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw60462
MethodWGS_Hawaiian_Waterston