WormBase Tree Display for Variation: WBVar00189526
expand all nodes | collapse all nodes | view schema
WBVar00189526 | Name | Public_name | WBVar00189526 | |||
---|---|---|---|---|---|---|
Other_name | haw56802 | |||||
cewivar00206357 | ||||||
T13A10.1.1:c.77C>A | ||||||
CE07483:p.Pro26Gln | ||||||
HGVSg | CHROMOSOME_IV:g.6276521C>A | |||||
Sequence_details | SMap | S_parent | Sequence | T13A10 | ||
Flanking_sequences | atgactgtctctgttgggtgcaaac | aaaggctaagaaaccaaaagcaact | ||||
Mapping_target | T13A10 | |||||
Type_of_mutation | Substitution | C | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | ||||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | ||||||
Status | Live | |||||
Affects | Gene | WBGene00020468 | ||||
Transcript | T13A10.1.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.45 | tolerated | ||||
PolyPhen | 0 | benign | ||||
HGVSc | T13A10.1.1:c.77C>A | |||||
HGVSp | CE07483:p.Pro26Gln | |||||
cDNA_position | 390 | |||||
CDS_position | 77 | |||||
Protein_position | 26 | |||||
Exon_number | 3/5 | |||||
Codon_change | cCa/cAa | |||||
Amino_acid_change | P/Q | |||||
Remark | [20081124 db] this Variation was previously named hw56802 | |||||
Method | WGS_Hawaiian_Waterston |