WormBase Tree Display for Variation: WBVar00186340

WBVar00186340 Name: Public_name: WBVar00186340
    Other_name: haw53616
      cewivar00154287
      CE33955:p.Ala74Thr
      Y94H6A.9b.1:c.220G>A
      CE48955:p.Ala182Thr
      Y94H6A.9d.1:c.544G>A
      CE27555:p.Ala182Thr
      Y94H6A.9a.1:c.544G>A
    HGVSg: CHROMOSOME_IV:g.2723027C>T
  Sequence_details: SMap: S_parent: Sequence: Y94H6A
    Flanking_sequences: gcagatgatgtcccagcagtggtgg agacgacgatgattgtcccaaaact
    Mapping_target: Y94H6A
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004600 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006629 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006637 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022899 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023192 From_analysis: Million_mutation_project_reanalysis
      WBStrain00024204 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00022381
    Transcript: Y94H6A.9a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.46 tolerated
        PolyPhen: 0.003 benign
        HGVSc: Y94H6A.9a.1:c.544G>A
        HGVSp: CE27555:p.Ala182Thr
        cDNA_position: 544
        CDS_position: 544
        Protein_position: 182
        Exon_number: 5/8
        Codon_change: Gcc/Acc
        Amino_acid_change: A/T
      Y94H6A.9b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.61 tolerated
        PolyPhen: 0.001 benign
        HGVSc: Y94H6A.9b.1:c.220G>A
        HGVSp: CE33955:p.Ala74Thr
        cDNA_position: 220
        CDS_position: 220
        Protein_position: 74
        Exon_number: 2/4
        Codon_change: Gcc/Acc
        Amino_acid_change: A/T
      Y94H6A.9d.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.58 tolerated
        PolyPhen: 0.25 benign
        HGVSc: Y94H6A.9d.1:c.544G>A
        HGVSp: CE48955:p.Ala182Thr
        cDNA_position: 544
        CDS_position: 544
        Protein_position: 182
        Exon_number: 5/5
        Codon_change: Gcc/Acc
        Amino_acid_change: A/T
  Remark: [20081124 db] this Variation was previously named hw53616
  Method: WGS_Hawaiian_Waterston