WormBase Tree Display for Variation: WBVar00184498
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WBVar00184498 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00184498 | |||
Other_name | haw51774 | ||||
Y41D4A.4e.1:c.1658C>A | |||||
Y41D4A.4b.1:c.1607+60C>A | |||||
Y41D4A.4a.1:c.1598+60C>A | |||||
Y41D4A.4c.1:c.1394+60C>A | |||||
CE49093:p.Thr553Lys | |||||
HGVSg | CHROMOSOME_IV:g.1750549C>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y41D4A | |
Flanking_sequences | attggacaaaaaacgaaaaaaaaaa | aaaaaaaaaaatcgattttttagcc | |||
Mapping_target | Y41D4A | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WBStrain00026322 | From_analysis | WGS_De_Bono | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
History | Acquires_merge | WBVar01339885 | |||
Status | Live | ||||
Affects | Gene | WBGene00021506 | |||
Transcript | Y41D4A.4e.1 (11) | ||||
Y41D4A.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41D4A.4b.1:c.1607+60C>A | ||||
Intron_number | 5/5 | ||||
Y41D4A.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41D4A.4a.1:c.1598+60C>A | ||||
Intron_number | 6/7 | ||||
Y41D4A.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41D4A.4c.1:c.1394+60C>A | ||||
Intron_number | 4/4 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw51774 | ||||
Method | WGS_Hawaiian_Waterston |