WormBase Tree Display for Variation: WBVar00182312
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WBVar00182312 | Name | Public_name | WBVar00182312 | ||
---|---|---|---|---|---|
Other_name | haw49588 | ||||
haw147818 | |||||
cewivar00153881 | |||||
Y37D8A.23b.1:c.58+416T>C | |||||
Y37D8A.23c.1:c.30+416T>C | |||||
Y37D8A.23a.1:c.58+416T>C | |||||
HGVSg | CHROMOSOME_III:g.12943134T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y37D8A | |
Flanking_sequences | ttcgtgtactcctcgtggagaagtt | gtgtgcagttttgcccattttcgct | |||
Mapping_target | Y37D8A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01338996 | |||
WBVar00567683 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006762 | |||
Transcript | Y37D8A.23c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y37D8A.23c.1:c.30+416T>C | ||||
Intron_number | 1/5 | ||||
Y37D8A.23b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37D8A.23b.1:c.58+416T>C | ||||
Intron_number | 1/8 | ||||
Y37D8A.23a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37D8A.23a.1:c.58+416T>C | ||||
Intron_number | 2/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw49588 | ||||
Method | WGS_Hawaiian_Waterston |