WormBase Tree Display for Variation: WBVar00175593

WBVar00175593 Name: Public_name: WBVar00175593
    Other_name (20)
    HGVSg: CHROMOSOME_II:g.11061252A>G
  Sequence_details: SMap: S_parent: Sequence: F45E10
    Flanking_sequences: tagagttttaaaaaaagcgaacccc attgttattgacgtggacaggcgaa
    Mapping_target: F45E10
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (162)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      WGS_Stein
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
      WGS_Andersen
    History: Acquires_merge: WBVar01439776
        WBVar01244470
        WBVar01439777
        WBVar00602058
        WBVar01376374
        WBVar00229723
        WBVar00602059
        WBVar00602060
        WBVar00552867
        WBVar01311348
    Status: Live
  Affects: Gene: WBGene00006788
    Transcript: F45E10.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F45E10.1b.1:c.2390-105T>C
        Intron_number: 16/22
      F45E10.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F45E10.1a.1:c.2513-105T>C
        Intron_number: 18/23
      F45E10.1f.1 (12)
      F45E10.1c.1 (12)
      F45E10.1e.1 (12)
      F45E10.1d.1 (12)
      F45E10.1g.1 (12)
      F45E10.1h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F45E10.1h.1:c.2390-105T>C
        Intron_number: 16/21
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw28843
  Method: WGS_Hawaiian_Waterston