WormBase Tree Display for Variation: WBVar00174509
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WBVar00174509 | Name | Public_name | WBVar00174509 | ||
---|---|---|---|---|---|
Other_name | snp_ZK1067[1] | ||||
haw27759 | |||||
haw132258 | |||||
cewivar00139971 | |||||
ZK1067.6a.1:c.449-394C>T | |||||
ZK1067.5.1:c.*393-394C>T | |||||
HGVSg | CHROMOSOME_II:g.9186147G>A | ||||
Sequence_details | SMap | S_parent | Sequence | ZK1067 | |
Flanking_sequences | tgattgagagaaagtgtgggaaggt | agaagtagagaaaacaagatgatca | |||
Mapping_target | ZK1067 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (28) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00248673 | |||
WBVar00552123 | |||||
WBVar01374906 | |||||
WBVar01243010 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006659 | |||
WBGene00006367 | |||||
Transcript | ZK1067.5.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1067.5.1:c.*393-394C>T | ||||
Intron_number | 10/15 | ||||
ZK1067.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1067.6a.1:c.449-394C>T | ||||
Intron_number | 3/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw27759 | ||||
Method | WGS_Hawaiian_Waterston |