WormBase Tree Display for Variation: WBVar00174445
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| WBVar00174445 | Name | Public_name | WBVar00174445 | ||
|---|---|---|---|---|---|
| Other_name | haw27695 | ||||
| haw132215 | |||||
| cewivar00139919 | |||||
| T24H10.7a.1:c.708-2830C>T | |||||
| T24H10.7h.1:c.510-2830C>T | |||||
| T24H10.7d.1:c.215+491C>T | |||||
| T24H10.7b.1:c.648-2830C>T | |||||
| T24H10.7i.1:c.399-2830C>T | |||||
| T24H10.7g.1:c.276-2830C>T | |||||
| T24H10.7f.1:c.552-2830C>T | |||||
| HGVSg | CHROMOSOME_II:g.9128118C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T24H10 | |
| Flanking_sequences | gttccttttgataattcgcaaaaca | gtattaaaatgcagcatcacgtcat | |||
| Mapping_target | T24H10 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (29) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01309152 | |||
| WBVar01242935 | |||||
| WBVar00552080 | |||||
| WBVar01374831 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012005 | |||
| Transcript | T24H10.7g.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24H10.7g.1:c.276-2830C>T | ||||
| Intron_number | 2/3 | ||||
| T24H10.7f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24H10.7f.1:c.552-2830C>T | ||||
| Intron_number | 6/8 | ||||
| T24H10.7i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24H10.7i.1:c.399-2830C>T | ||||
| Intron_number | 3/4 | ||||
| T24H10.7h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24H10.7h.1:c.510-2830C>T | ||||
| Intron_number | 4/5 | ||||
| T24H10.7a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24H10.7a.1:c.708-2830C>T | ||||
| Intron_number | 7/9 | ||||
| T24H10.7b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24H10.7b.1:c.648-2830C>T | ||||
| Intron_number | 7/9 | ||||
| T24H10.7d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24H10.7d.1:c.215+491C>T | ||||
| Intron_number | 2/4 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw27695 | ||||
| Method | WGS_Hawaiian_Waterston |
