WormBase Tree Display for Variation: WBVar00173121
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| WBVar00173121 | Name | Public_name | WBVar00173121 | ||
|---|---|---|---|---|---|
| Other_name | pas37321 | ||||
| haw26371 | |||||
| haw131347 | |||||
| cewivar00091460 | |||||
| C27H5.4b.1:c.354C>T | |||||
| CE50636:p.Phe122= | |||||
| CE50643:p.Phe118= | |||||
| C27H5.4a.1:c.366C>T | |||||
| HGVSg | CHROMOSOME_II:g.7164223G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C27H5 | |
| Flanking_sequences | ccaaagtgagtagagtatcataaat | aatagagaaacaagaaggtgaagag | |||
| Mapping_target | C27H5 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (160) | |||||
| Laboratory | RW | ||||
| QX | |||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01307509 | |||
| WBVar01373161 | |||||
| WBVar00551212 | |||||
| WBVar00225545 | |||||
| WBVar01241124 | |||||
| WBVar01438383 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016174 | |||
| Transcript | C27H5.4a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C27H5.4a.1:c.366C>T | ||||
| HGVSp | CE50636:p.Phe122= | ||||
| cDNA_position | 466 | ||||
| CDS_position | 366 | ||||
| Protein_position | 122 | ||||
| Exon_number | 5/11 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| C27H5.4b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C27H5.4b.1:c.354C>T | ||||
| HGVSp | CE50643:p.Phe118= | ||||
| cDNA_position | 366 | ||||
| CDS_position | 354 | ||||
| Protein_position | 118 | ||||
| Exon_number | 5/11 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw26371 | ||||
| Method | WGS_Hawaiian_Waterston |
