WormBase Tree Display for Variation: WBVar00173112
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WBVar00173112 | Name | Public_name | WBVar00173112 | ||
---|---|---|---|---|---|
Other_name | pas37315 | ||||
haw26362 | |||||
cewivar00091448 | |||||
C27H5.2b.1:c.26-346A>C | |||||
C27H5.2a.1:c.26-346A>C | |||||
C27H5.2c.1:c.26-346A>C | |||||
C27H5.2d.1:c.26-346A>C | |||||
HGVSg | CHROMOSOME_II:g.7156705A>C | ||||
Sequence_details | SMap | S_parent | Sequence | C27H5 | |
Flanking_sequences | ttttttaatttttcaaactcaaaaa | cacacatagaaacacatagaaacaa | |||
Mapping_target | C27H5 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (162) | |||||
Laboratory | RW | ||||
QX | |||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01438380 | |||
WBVar01307499 | |||||
WBVar01241114 | |||||
WBVar00225539 | |||||
WBVar01373148 | |||||
Status | Live | ||||
Affects | Gene | WBGene00016172 | |||
Transcript | C27H5.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C27H5.2a.1:c.26-346A>C | ||||
Intron_number | 2/14 | ||||
C27H5.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C27H5.2b.1:c.26-346A>C | ||||
Intron_number | 1/12 | ||||
C27H5.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C27H5.2d.1:c.26-346A>C | ||||
Intron_number | 2/12 | ||||
C27H5.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C27H5.2c.1:c.26-346A>C | ||||
Intron_number | 2/13 | ||||
Reference | WBPaper00040707 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw26362 | ||||
Method | WGS_Hawaiian_Waterston |