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WormBase Tree Display for Variation: WBVar00173112

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Name Class

WBVar00173112NamePublic_nameWBVar00173112
Other_namepas37315
haw26362
cewivar00091448
C27H5.2b.1:c.26-346A>C
C27H5.2a.1:c.26-346A>C
C27H5.2c.1:c.26-346A>C
C27H5.2d.1:c.26-346A>C
HGVSgCHROMOSOME_II:g.7156705A>C
Sequence_detailsSMapS_parentSequenceC27H5
Flanking_sequencesttttttaatttttcaaactcaaaaacacacatagaaacacatagaaacaa
Mapping_targetC27H5
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (162)
LaboratoryRW
QX
AX
PersonWBPerson1562
WBPerson6900
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
WGS_Andersen
HistoryAcquires_mergeWBVar01438380
WBVar01307499
WBVar01241114
WBVar00225539
WBVar01373148
StatusLive
AffectsGeneWBGene00016172
TranscriptC27H5.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC27H5.2a.1:c.26-346A>C
Intron_number2/14
C27H5.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC27H5.2b.1:c.26-346A>C
Intron_number1/12
C27H5.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC27H5.2d.1:c.26-346A>C
Intron_number2/12
C27H5.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC27H5.2c.1:c.26-346A>C
Intron_number2/13
ReferenceWBPaper00040707
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw26362
MethodWGS_Hawaiian_Waterston