WormBase Tree Display for Variation: WBVar00165866
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WBVar00165866 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00165866 | ||||
Other_name | haw19116 | |||||
cewivar00179611 | ||||||
C40D2.3.1:c.1112T>A | ||||||
CE19375:p.Ile371Asn | ||||||
HGVSg | CHROMOSOME_II:g.1995442T>A | |||||
Sequence_details | SMap | S_parent | Sequence | C40D2 | ||
Flanking_sequences | aaaatatattcatttgaaaaatcaa | tggtaatggttactctaaagtcatg | ||||
Mapping_target | C40D2 | |||||
Type_of_mutation | Substitution | T | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | ||||||
Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | RW | |||||
AX | ||||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar01362061 | ||||
Status | Live | |||||
Affects | Gene | WBGene00016556 | ||||
Transcript | C40D2.3.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.31 | tolerated | ||||
PolyPhen | 0.553 | possibly_damaging | ||||
HGVSc | C40D2.3.1:c.1112T>A | |||||
HGVSp | CE19375:p.Ile371Asn | |||||
cDNA_position | 1121 | |||||
CDS_position | 1112 | |||||
Protein_position | 371 | |||||
Exon_number | 7/8 | |||||
Codon_change | aTt/aAt | |||||
Amino_acid_change | I/N | |||||
Reference | WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw19116 | |||||
Method | WGS_Hawaiian_Waterston |