WormBase Tree Display for Variation: WBVar00164041
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WBVar00164041 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00164041 | ||||
Other_name | haw17291 | |||||
cewivar00176343 | ||||||
M01D1.8.1:c.327T>G | ||||||
CE12256:p.Phe109Leu | ||||||
HGVSg | CHROMOSOME_II:g.1041931A>C | |||||
Sequence_details | SMap | S_parent | Sequence | M01D1 | ||
Flanking_sequences | cattcaggacatagagaaagtgatt | aaccagctttttgcatcaaactgtg | ||||
Mapping_target | M01D1 | |||||
Type_of_mutation | Substitution | A | C | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | ||||||
Million_mutation_project_reanalysis | ||||||
Laboratory | RW | |||||
AX | ||||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar01359359 | ||||
Status | Live | |||||
Affects | Gene | WBGene00305498 | ||||
WBGene00019703 | ||||||
Transcript | K02E7.15 | |||||
M01D1.8.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
SIFT | 1 | tolerated_low_confidence | ||||
PolyPhen | 0.007 | benign | ||||
HGVSc | M01D1.8.1:c.327T>G | |||||
HGVSp | CE12256:p.Phe109Leu | |||||
cDNA_position | 352 | |||||
CDS_position | 327 | |||||
Protein_position | 109 | |||||
Exon_number | 3/4 | |||||
Codon_change | ttT/ttG | |||||
Amino_acid_change | F/L | |||||
Reference | WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw17291 | |||||
Method | WGS_Hawaiian_Waterston |