WormBase Tree Display for Variation: WBVar00162293
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| WBVar00162293 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00162293 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_I:g.14629165C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y105E8B | |
| Flanking_sequences | ggagcttaagaatgttttaagccaa | aaaattttttcaagaacgtatagca | |||
| Mapping_target | Y105E8B | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01290471 | |||
| WBVar01356677 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00002978 | |||
| Transcript | Y105E8B.1s.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8B.1s.1:c.240+720G>T | ||||
| Intron_number | 3/8 | ||||
| Y105E8B.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8B.1d.1:c.240+720G>T | ||||
| Intron_number | 4/11 | ||||
| Y105E8B.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8B.1g.1:c.240+720G>T | ||||
| Intron_number | 4/9 | ||||
| Y105E8B.1o.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8B.1o.1:c.240+720G>T | ||||
| Intron_number | 4/10 | ||||
| Y105E8B.1q.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8B.1q.1:c.240+720G>T | ||||
| Intron_number | 3/8 | ||||
| Y105E8B.1p.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8B.1p.1:c.240+720G>T | ||||
| Intron_number | 3/8 | ||||
| Y105E8B.1r.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8B.1r.1:c.240+720G>T | ||||
| Intron_number | 3/8 | ||||
| Y105E8B.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8B.1f.1:c.240+720G>T | ||||
| Intron_number | 4/10 | ||||
| Y105E8B.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8B.1a.1:c.240+720G>T | ||||
| Intron_number | 4/10 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw15543 | ||||
| Method | WGS_Hawaiian_Waterston |
