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WormBase Tree Display for Variation: WBVar00157715

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Name Class

WBVar00157715NamePublic_nameWBVar00157715
Other_namesnp_F53B8[1]
haw10965
cewivar00170679
ZK1151.1m.1:c.1072-76A>G
ZK1151.1k.1:c.691-76A>G
ZK1151.1i.1:c.1072-76A>G
ZK1151.1h.1:c.691-76A>G
ZK1151.1j.1:c.691-76A>G
ZK1151.1f.1:c.691-76A>G
ZK1151.1b.1:c.1132-76A>G
ZK1151.1c.1:c.691-76A>G
ZK1151.1a.1:c.1501-76A>G
ZK1151.1d.1:c.598-76A>G
ZK1151.1l.1:c.1072-76A>G
ZK1151.1e.1:c.691-76A>G
HGVSgCHROMOSOME_I:g.11778216T>C
Sequence_detailsSMapS_parentSequenceF53B8
Flanking_sequencesgcctttttatctgtattttcagcaatttcagtcttttcaagcaattttaa
Mapping_targetF53B8
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00006629From_analysisMillion_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00022902From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00244994
WBVar01285520
WBVar01424447
WBVar01349935
StatusLive
AffectsGeneWBGene00006876
TranscriptZK1151.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1e.1:c.691-76A>G
Intron_number8/16
ZK1151.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1b.1:c.1132-76A>G
Intron_number10/19
ZK1151.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1f.1:c.691-76A>G
Intron_number7/15
ZK1151.1i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1i.1:c.1072-76A>G
Intron_number3/11
ZK1151.1h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1h.1:c.691-76A>G
Intron_number7/16
ZK1151.1m.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1m.1:c.1072-76A>G
Intron_number3/23
ZK1151.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1c.1:c.691-76A>G
Intron_number8/31
ZK1151.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1a.1:c.1501-76A>G
Intron_number12/21
ZK1151.1k.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1k.1:c.691-76A>G
Intron_number7/27
ZK1151.1j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1j.1:c.691-76A>G
Intron_number7/29
ZK1151.1l.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1l.1:c.1072-76A>G
Intron_number3/24
ZK1151.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1151.1d.1:c.598-76A>G
Intron_number7/16
ReferenceWBPaper00004703
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw10965
MethodWGS_Hawaiian_Waterston