WormBase Tree Display for Variation: WBVar00157715
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WBVar00157715 | Name | Public_name | WBVar00157715 | ||
---|---|---|---|---|---|
Other_name | snp_F53B8[1] | ||||
haw10965 | |||||
cewivar00170679 | |||||
ZK1151.1m.1:c.1072-76A>G | |||||
ZK1151.1k.1:c.691-76A>G | |||||
ZK1151.1i.1:c.1072-76A>G | |||||
ZK1151.1h.1:c.691-76A>G | |||||
ZK1151.1j.1:c.691-76A>G | |||||
ZK1151.1f.1:c.691-76A>G | |||||
ZK1151.1b.1:c.1132-76A>G | |||||
ZK1151.1c.1:c.691-76A>G | |||||
ZK1151.1a.1:c.1501-76A>G | |||||
ZK1151.1d.1:c.598-76A>G | |||||
ZK1151.1l.1:c.1072-76A>G | |||||
ZK1151.1e.1:c.691-76A>G | |||||
HGVSg | CHROMOSOME_I:g.11778216T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F53B8 | |
Flanking_sequences | gcctttttatctgtattttcagcaa | tttcagtcttttcaagcaattttaa | |||
Mapping_target | F53B8 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_De_Bono | |||||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00244994 | |||
WBVar01285520 | |||||
WBVar01424447 | |||||
WBVar01349935 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006876 | |||
Transcript | ZK1151.1e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1e.1:c.691-76A>G | ||||
Intron_number | 8/16 | ||||
ZK1151.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1b.1:c.1132-76A>G | ||||
Intron_number | 10/19 | ||||
ZK1151.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1f.1:c.691-76A>G | ||||
Intron_number | 7/15 | ||||
ZK1151.1i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1i.1:c.1072-76A>G | ||||
Intron_number | 3/11 | ||||
ZK1151.1h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1h.1:c.691-76A>G | ||||
Intron_number | 7/16 | ||||
ZK1151.1m.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1m.1:c.1072-76A>G | ||||
Intron_number | 3/23 | ||||
ZK1151.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1c.1:c.691-76A>G | ||||
Intron_number | 8/31 | ||||
ZK1151.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1a.1:c.1501-76A>G | ||||
Intron_number | 12/21 | ||||
ZK1151.1k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1k.1:c.691-76A>G | ||||
Intron_number | 7/27 | ||||
ZK1151.1j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1j.1:c.691-76A>G | ||||
Intron_number | 7/29 | ||||
ZK1151.1l.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1l.1:c.1072-76A>G | ||||
Intron_number | 3/24 | ||||
ZK1151.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1151.1d.1:c.598-76A>G | ||||
Intron_number | 7/16 | ||||
Reference | WBPaper00004703 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw10965 | ||||
Method | WGS_Hawaiian_Waterston |