WormBase Tree Display for Variation: WBVar00146429
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WBVar00146429 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h104 | ||||
Other_name | Y110A7A.17b.1:c.305C>T | |||||
CE23241:p.Ser102Phe | ||||||
CE53900:p.Ser102Phe | ||||||
Y110A7A.17a.1:c.305C>T | ||||||
HGVSg | CHROMOSOME_I:g.5126834G>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y110A7A | ||
Flanking_sequences | ATATACATATATATTACAAACTAACTTATTTAAATCGTAG | ATACCCTTGCAAGTAGATAGAAGAGTCTAGCTCCGCTCAA | ||||
Mapping_target | CHROMOSOME_I | |||||
Source_location | 200 | CHROMOSOME_I | 5126837 | 5126837 | ||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023696 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00003132 | ||||
Transcript | Y110A7A.17b.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
HGVSc | Y110A7A.17b.1:c.305C>T | |||||
HGVSp | CE53900:p.Ser102Phe | |||||
cDNA_position | 319 | |||||
CDS_position | 305 | |||||
Protein_position | 102 | |||||
Exon_number | 3/13 | |||||
Codon_change | tCc/tTc | |||||
Amino_acid_change | S/F | |||||
Y110A7A.17a.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
HGVSc | Y110A7A.17a.1:c.305C>T | |||||
HGVSp | CE23241:p.Ser102Phe | |||||
cDNA_position | 317 | |||||
CDS_position | 305 | |||||
Protein_position | 102 | |||||
Exon_number | 3/13 | |||||
Codon_change | tCc/tTc | |||||
Amino_acid_change | S/F | |||||
Genetics | Interpolated_map_position | I | -0.39528 | |||
Mapping_data | In_2_point | 2531 | ||||
In_multi_point | 1017 | |||||
In_pos_neg_data | 2566 | |||||
2687 | ||||||
6152 | ||||||
6324 | ||||||
6364 | ||||||
6382 | ||||||
6399 | ||||||
6410 | ||||||
6649 | ||||||
Description | Phenotype (2) | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | Substitution_allele |