WormBase Tree Display for Variation: WBVar00145505

WBVar00145505 Evidence: Paper_evidence: WBPaper00040652
  Name: Public_name: gk54
    Other_name: C18A11.7b.1:c.153_213+72del
      C18A11.7a.1:c.1101_1161+72del
    HGVSg: CHROMOSOME_X:g.8052295_8052427del
  Sequence_details: SMap: S_parent: Sequence: C18A11
    Flanking_sequences: agatttgagcagatggcattttggatgagg cgtccagagttttcgacctccttctgtaaa
    Mapping_target: C18A11
    Type_of_mutation: Deletion
    PCR_product: GK54_external
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035507
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00001000
    Transcript: C18A11.7a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C18A11.7a.1:c.1101_1161+72del
        cDNA_position: 1109-?
        CDS_position: 1101-?
        Protein_position: 367-?
        Intron_number: 9/13
        Exon_number: 9/14
      C18A11.7b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C18A11.7b.1:c.153_213+72del
        cDNA_position: 155-?
        CDS_position: 153-?
        Protein_position: 51-?
        Intron_number: 3/7
        Exon_number: 3/8
    Interactor: WBInteraction000501326
  Isolation: Mutagen: UV/TMP
  Description: Phenotype: WBPhenotype:0001889 Paper_evidence: WBPaper00040652
        Curator_confirmed: WBPerson712
        Remark: Attachment complexes are disorganised (e.g. not nicely arrayed Z and M lines) in dim-1 mutants. Paper_evidence: WBPaper00040652
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00040652
          Curator_confirmed: WBPerson712
        Temperature_sensitive: Heat_sensitive: 25 Paper_evidence: WBPaper00040652
              Curator_confirmed: WBPerson712
  Reference: WBPaper00040652
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele