WormBase Tree Display for Variation: WBVar00143992
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WBVar00143992 | Evidence | Paper_evidence | WBPaper00006370 | ||||
---|---|---|---|---|---|---|---|
Person_evidence | WBPerson625 | ||||||
Name | Public_name | e1417 | |||||
Other_name | F36H1.4h.2:c.56-209C>T | ||||||
F36H1.4b.1:c.56-209C>T | |||||||
F36H1.4g.1:c.56-203C>T | |||||||
F36H1.4d.1:c.56-209C>T | |||||||
F36H1.4b.3:c.56-209C>T | |||||||
F36H1.4c.1:c.56-203C>T | |||||||
F36H1.4h.1:c.56-209C>T | |||||||
F36H1.4a.1:c.56-203C>T | |||||||
F36H1.4b.2:c.56-209C>T | |||||||
F36H1.4f.1:c.56-209C>T | |||||||
HGVSg | CHROMOSOME_IV:g.11059196C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F36H1 | |||
Flanking_sequences | tgctggttttttcttgtgac | ctgaaaactgtacacacaggtg | |||||
Mapping_target | F36H1 | ||||||
Type_of_mutation | Substitution | C | T | Person_evidence | WBPerson625 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004330 | ||||||
WBStrain00026836 | |||||||
WBStrain00040217 | |||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00002992 | |||||
Transcript | F36H1.4g.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4g.1:c.56-203C>T | ||||||
Intron_number | 4/13 | ||||||
F36H1.4b.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4b.3:c.56-209C>T | ||||||
Intron_number | 2/10 | ||||||
F36H1.4d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4d.1:c.56-209C>T | ||||||
Intron_number | 3/13 | ||||||
F36H1.4f.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4f.1:c.56-209C>T | ||||||
Intron_number | 1/10 | ||||||
F36H1.4b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4b.1:c.56-209C>T | ||||||
Intron_number | 3/12 | ||||||
F36H1.4c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4c.1:c.56-203C>T | ||||||
Intron_number | 4/13 | ||||||
F36H1.4a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4a.1:c.56-203C>T | ||||||
Intron_number | 4/13 | ||||||
F36H1.4h.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4h.2:c.56-209C>T | ||||||
Intron_number | 3/12 | ||||||
F36H1.4h.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4h.1:c.56-209C>T | ||||||
Intron_number | 4/13 | ||||||
F36H1.4b.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F36H1.4b.2:c.56-209C>T | ||||||
Intron_number | 4/13 | ||||||
Interactor | WBInteraction000009223 | ||||||
WBInteraction000500498 | |||||||
WBInteraction000524354 | |||||||
WBInteraction000524526 | |||||||
WBInteraction000538539 | |||||||
WBInteraction000538543 | |||||||
WBInteraction000556184 | |||||||
Isolation | Mutagen | EMS | |||||
Forward_genetics | standard phenotypic screen | ||||||
Genetics | Interpolated_map_position | IV | 4.82035 | ||||
Mapping_data | In_multi_point | 117 | |||||
382 | |||||||
383 | |||||||
603 | |||||||
678 | |||||||
774 | |||||||
1135 | |||||||
1137 | |||||||
In_pos_neg_data | 834 | ||||||
970 | |||||||
Description (2) | |||||||
Reference (13) | |||||||
Remark | N2 tgctggttttttcttgtgaccctgaaaactgtacacacaggtg | ||||||
Method | Substitution_allele |