WormBase Tree Display for Variation: WBVar00143714
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| WBVar00143714 | Name | Public_name | e1062 | ||||
|---|---|---|---|---|---|---|---|
| Other_name | F14F3.1a.1:c.445C>T | ||||||
| F14F3.1a.2:c.445C>T | |||||||
| CE24899:p.Arg149Ter | |||||||
| HGVSg | CHROMOSOME_X:g.10511402C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F14F3 | |||
| Flanking_sequences | acaatgcaaacagagctttacgatagaatt | gaatagttgataactttccgtaagtttcaa | |||||
| Mapping_target | F14F3 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00024640 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00004234 | ||||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006870 | |||||
| Transcript | F14F3.1a.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F14F3.1a.1:c.445C>T | ||||||
| HGVSp | CE24899:p.Arg149Ter | ||||||
| cDNA_position | 747 | ||||||
| CDS_position | 445 | ||||||
| Protein_position | 149 | ||||||
| Exon_number | 7/14 | ||||||
| Codon_change | Cga/Tga | ||||||
| Amino_acid_change | R/* | ||||||
| F14F3.1a.2 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | F14F3.1a.2:c.445C>T | ||||||
| HGVSp | CE24899:p.Arg149Ter | ||||||
| cDNA_position | 537 | ||||||
| CDS_position | 445 | ||||||
| Protein_position | 149 | ||||||
| Exon_number | 6/13 | ||||||
| Codon_change | Cga/Tga | ||||||
| Amino_acid_change | R/* | ||||||
| Isolation | Mutagen | EMS | Paper_evidence | WBPaper00024640 | |||
| Genetics | Interpolated_map_position | X | 2.22424 | ||||
| Description (2) | |||||||
| Reference | WBPaper00000214 | ||||||
| WBPaper00014314 | |||||||
| Method | Substitution_allele |
