WormBase Tree Display for Variation: WBVar00106817
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| WBVar00106817 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00106817 | |||
| Other_name | pas11676 | ||||
| cewivar00100129 | |||||
| W07G1.3.2:c.92-692A>G | |||||
| W07G1.3.1:c.92-692A>G | |||||
| HGVSg | CHROMOSOME_II:g.13954858T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | W07G1 | |
| Flanking_sequences | caaattttttagaacttctttgtgaaaagcacatgtcaaaattcggcaaaaaattacttgaaaatttctgaaaaatttccaaaaaaaaaaaaattagaaatttttagggttttttttttcaatttcgacaaaaaattccgaagctctcgaagcaaaatgttctcatcaaaattccaaaaaattggagttttcatcttaaattcacaaaaaaatgaaccattttgtgggcggagtcgaacatagaccccgcccacttcttggtttactttccgattttgaaataagttttcaaaacaccgc | ttgaagtttttgccattttctataaatttttacattttcacggagttatagatgttccgaaattcgaaacacatttccaactatgaatagaccacgaccattttctgggcggagctaacattgtggtcacgcccactttttggagaaaaaaagctctactaacagggggaaaactacttagatttcaaacaaaaaacaaaaaaccaaaaaaaaagaacagttcttctcgtcggtcacttctacgaccaccacctgcgaacaaaatgtgacgtgagagagaaaggaaagaagaaattgaag | |||
| Mapping_target | W07G1 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (26) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01251978 | |||
| WBVar01318697 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012330 | |||
| Transcript | W07G1.3.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W07G1.3.1:c.92-692A>G | ||||
| Intron_number | 3/7 | ||||
| W07G1.3.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W07G1.3.2:c.92-692A>G | ||||
| Intron_number | 2/6 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
