WormBase Tree Display for Variation: WBVar00106572
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| WBVar00106572 | Name | Public_name | WBVar00106572 | ||
|---|---|---|---|---|---|
| Other_name | pas11431 | ||||
| cewivar00098367 | |||||
| Y48C3A.17d.1:c.444-127T>G | |||||
| Y48C3A.17b.1:c.444-127T>G | |||||
| HGVSg | CHROMOSOME_II:g.13408896T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y48C3A | |
| Flanking_sequences | gaatgaaaaaagaggaaaaaagaaagagaaaaaaggaaacaaagaatgaaaaaaagaggaaaaaaagttttttttcttttttcattcttttttcattttttacattaataatgaaaaaagtgaaaaaaggaaaaaaattgtaaaaaaaagagaaaaaaggaaaaaaagaatgaaaaaaaaagtgttttctttctttttttcattctttttcattttttacattaatattgaaaaaaagtgaaaaaaaaatgtttcaactgagaaagtaagaaaaaagagaattccaatttttggacaaaa | aaggaaaaaatgaaagaaaaactgaaaaaaataattttaaaaaatggaaaaaaatgaaatatttaacaaataaaatgagaaaaattgtttatcatttttttaaataaaaaaaagaactattttcagttatgtgagcaaagaagacattcgaaaaaccgccgagccgaacacaaaatcgattatcgtaaaatcagaactggatacgagcagctcctttgaggttcgattttttggcgatttttaaattttatttcgaaaaaaatttaagaacataaattttcagctaatttttagctaaaa | |||
| Mapping_target | Y48C3A | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (23) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01441482 | |||
| WBVar01441483 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00305764 | |||
| WBGene00001162 | |||||
| Transcript | Y48C3A.17d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y48C3A.17d.1:c.444-127T>G | ||||
| Intron_number | 3/6 | ||||
| Y48C3A.26 | |||||
| Y48C3A.17b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y48C3A.17b.1:c.444-127T>G | ||||
| Intron_number | 3/5 | ||||
| Method | WGS_Pasadena_Quinlan |
