WormBase Tree Display for Variation: WBVar00106000

WBVar00106000 Name: Public_name: WBVar00106000
    Other_name (16)
    HGVSg: CHROMOSOME_II:g.11847731A>G
  Sequence_details: SMap: S_parent: Sequence: T27D12
    Flanking_sequences: caatcggctcgtgttgattagtctgagcgtacagaagtggggccaatggactgcgatctccctgaaaatggaaaattgaaggttttggatcagaaaacttgaaagtatttttagaatactgtaggggtactgtaaaagtcctgtacgagttctgtagcagtagtgtagggcactttgagcttactgtagaagtaatgtatgattactatagggttggaagtaatgcagtagtattgtagtattactgtgggggaactgtaggactacaaataaatagtttcaaattaatacctgatcttc tgaagtggagattgtggaagaagagtgtttccggagatattcctgtcagtcatcaacgcatttccagacgacatgtgagcaccattcgcagcgagcgagccacgtctagaatactttctgaatggaaacgggtttaaagacgtgcaacactaagagcgagggggaagtggtggttgtttaagagttgcgggaaaggatgtgcatgctctatacaggaagaactcgtgcaatcaaaccacaatagacacaccttagattgttgatcgtgctgaagatttccgatgccgtgcgacttctgaa
    Mapping_target: T27D12
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004604 From_analysis: WGS_Pasadena_Quinlan
      WBStrain00022852 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022856 From_analysis: Million_mutation_project_reanalysis
    Person: WBPerson6900
    Analysis: WGS_Pasadena_Quinlan
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00000528
    Transcript: T27D12.2b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: T27D12.2b.1:c.2229T>C
        HGVSp: CE28090:p.His743=
        cDNA_position: 2232
        CDS_position: 2229
        Protein_position: 743
        Exon_number: 14/19
        Codon_change: caT/caC
        Amino_acid_change: H
      T27D12.2a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: T27D12.2a.1:c.2241T>C
        HGVSp: CE27450:p.His747=
        cDNA_position: 2242
        CDS_position: 2241
        Protein_position: 747
        Exon_number: 14/19
        Codon_change: caT/caC
        Amino_acid_change: H
      T27D12.2f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: T27D12.2f.1:c.2073T>C
        HGVSp: CE54346:p.His691=
        cDNA_position: 2073
        CDS_position: 2073
        Protein_position: 691
        Exon_number: 12/16
        Codon_change: caT/caC
        Amino_acid_change: H
      T27D12.2c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: T27D12.2c.1:c.2442T>C
        HGVSp: CE54385:p.His814=
        cDNA_position: 2442
        CDS_position: 2442
        Protein_position: 814
        Exon_number: 14/18
        Codon_change: caT/caC
        Amino_acid_change: H
      T27D12.2d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: T27D12.2d.1:c.2256T>C
        HGVSp: CE54369:p.His752=
        cDNA_position: 2256
        CDS_position: 2256
        Protein_position: 752
        Exon_number: 12/16
        Codon_change: caT/caC
        Amino_acid_change: H
      T27D12.2g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: T27D12.2g.1:c.2106T>C
        HGVSp: CE54389:p.His702=
        cDNA_position: 2106
        CDS_position: 2106
        Protein_position: 702
        Exon_number: 13/17
        Codon_change: caT/caC
        Amino_acid_change: H
      T27D12.2e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: T27D12.2e.1:c.2262T>C
        HGVSp: CE54361:p.His754=
        cDNA_position: 2263
        CDS_position: 2262
        Protein_position: 754
        Exon_number: 15/20
        Codon_change: caT/caC
        Amino_acid_change: H
  Method: WGS_Pasadena_Quinlan