WormBase Tree Display for Variation: WBVar00104647
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| WBVar00104647 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00104647 | |||
| Other_name | pas9506 | ||||
| cewivar00092498 | |||||
| C26D10.5b.1:c.*221A>G | |||||
| C26D10.5a.1:c.*142A>G | |||||
| HGVSg | CHROMOSOME_II:g.8350336A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C26D10 | |
| Flanking_sequences | cgttttatttctacatacaataaaaatgaaaattgcagggacaaatttgtctcagaatccgaagatggtgcaagaagtagttccgagccccacgacactttggcgagataccatggaaatcactcggagcggcactatagcagtagccagtacatttgatttcatctgatcatgcatttcttcatattcatcttgtcacattgctaataatctcgttcaatttatgggtacacacagtgctgattcgacgacgcgtattttttctttttcccaattctcaattttcagttttgaattttg | atatttccatttaataccataacgggtatctgaatttatttctaaagccgattgtaattttgtgataccatttgcctatttctttcctattcttcttataccaatgtctactgttcccctctgtgcctttcaatgtttccaacggtgcttccccccatgagaccaaatttgtaaatcgcctgcggtgcgggtgtttttgaaaaataaatttattgactcttaacaaactgagaacttttctgaggctaagatcggtaacccgagaacattaaaaaaacggctggtgaaagaagattgtca | |||
| Mapping_target | C26D10 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (25) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01242216 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00001159 | |||
| Transcript | C26D10.5a.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C26D10.5a.1:c.*142A>G | ||||
| cDNA_position | 2123 | ||||
| Exon_number | 10/10 | ||||
| C26D10.5b.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C26D10.5b.1:c.*221A>G | ||||
| cDNA_position | 2022 | ||||
| Exon_number | 10/10 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
