WormBase Tree Display for Variation: WBVar00102344
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| WBVar00102344 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00102344 | |||
| Other_name | pas7203 | ||||
| cewivar00028758 | |||||
| Y49E10.21a.1:c.1975G>T | |||||
| CE54194:p.Ala659Ser | |||||
| HGVSg | CHROMOSOME_III:g.12465744G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y49E10 | |
| Flanking_sequences | agcaaaaaaaccgaaaaatttaataaaaaacatatattttccagcactgaagtcctcggatgtttctacactcaaatctactcgaatcttctgccccaactcgacgaacttcacaaaaccgatcactggaaccgtgaaaacgcgtctcgatctgaaatctgccgccttgatgctcttctgaaaatggcagcaaactcggacccatcaggagaactcgttcgtacagcattccgatcgattgacgaagaacaagtcattaaaatgctcggagagctcggaattcattcgacaagtgatcac | cttttcaggattatcagattttggcggaaaattggcagaaaatcgaggaaaagggattcggatatggcgattattaattaaaaatttttttttttaatttatgtatctttttttctgaataataattttatttcgaaactaaattgcaattgcgctccaatgccaaatgaactgtgaccttatatattgggtctcgttaggtatactcatttttcctggattttgctgtttttctgttgattttaatggtttttatgggaaaaaaattttctcaaaacaatttgaatttccaattttgcc | |||
| Mapping_target | Y49E10 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (142) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01449399 | |||
| WBVar01272924 | |||||
| WBVar01337759 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00013040 | |||
| Transcript | Y49E10.21a.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | Y49E10.21a.1:c.1975G>T | ||||
| HGVSp | CE54194:p.Ala659Ser | ||||
| cDNA_position | 1975 | ||||
| CDS_position | 1975 | ||||
| Protein_position | 659 | ||||
| Exon_number | 7/8 | ||||
| Codon_change | Gct/Tct | ||||
| Amino_acid_change | A/S | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
