WormBase Tree Display for Gene: WBGene00013040
expand all nodes | collapse all nodes | view schema
| WBGene00013040 | SMap | S_parent | Sequence | Y49E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y49E10.21 | |||||||
| Molecular_name | Y49E10.21a | ||||||||
| Y49E10.21a.1 | |||||||||
| CE54194 | |||||||||
| Y49E10.21b | |||||||||
| CE28707 | |||||||||
| Y49E10.21b.1 | |||||||||
| Other_name | CELE_Y49E10.21 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y49E10.21 | ||||||||
| DB_info | Database | AceView | gene | 3N547 | |||||
| WormQTL | gene | WBGene00013040 | |||||||
| WormFlux | gene | WBGene00013040 | |||||||
| NDB | locus_tag | CELE_Y49E10.21 | |||||||
| NCBI | gene | 190069 | |||||||
| RefSeq | protein | NM_001379954.3 | |||||||
| NM_001268244.3 | |||||||||
| TrEMBL | UniProtAcc | E1B6W2 | |||||||
| Q9XTU2 | |||||||||
| UniProt_GCRP | UniProtAcc | E1B6W2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Aug 2010 09:27:00 | WBPerson1983 | Event | Acquires_merge | WBGene00044910 | ||||
| Acquires_merge | WBGene00044910 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (214) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3893 | ||||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABaraapapp; I5 neuron; intestine; mechanosensory neurons; and rectal muscle based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including sma-2; sma-4; and smg-2 based on microarray and RNA-seq studies. Is affected by eight chemicals including rotenone; Zidovudine; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y49E10.21a | |||||||
| Y49E10.21b | |||||||||
| Corresponding_CDS_history | Y49E10.21:wp57 | ||||||||
| Y49E10.21a:wp275 | |||||||||
| Corresponding_transcript | Y49E10.21a.1 | ||||||||
| Y49E10.21b.1 | |||||||||
| Other_sequence | MH01583 | ||||||||
| Associated_feature | WBsf994650 | ||||||||
| WBsf994651 | |||||||||
| WBsf994652 | |||||||||
| WBsf1016203 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr1028052 | ||||||||
| Expr1035797 | |||||||||
| Expr1160460 | |||||||||
| Expr2007713 | |||||||||
| Expr2025954 | |||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (67) | |||||||||
| Interaction | WBInteraction000185179 | ||||||||
| WBInteraction000570977 | |||||||||
| WBInteraction000584360 | |||||||||
| Map_info | Positive | Positive_clone | Y49E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 17.9183 | |||||||
| Method | Gene |
