WormBase Tree Display for Variation: WBVar00101667
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| WBVar00101667 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00101667 | |||
| Other_name | pas6526 | ||||
| cewivar00110521 | |||||
| Y56A3A.18.1:c.127-146T>C | |||||
| HGVSg | CHROMOSOME_III:g.11918352A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y56A3A | |
| Flanking_sequences | gcttctgcctgtgtgtatggaacctctttcagcgtcttcactcggttcttgtgcaatttcgtcttgcgatgaagctgtcgggttttctcgtcgacgaaatgccgctcacactcgatgcagtaaaattgtccgtttcccggaagatcgtaatcgatctgaaaatgggttttttcttcgtttttgttggaatttttccgataaaatttcgattttgctctttttattgtattttttcgatggaatattctcacaatcttatgaaaataacattttccttcgaaaaaagagaataaaatgaat | aaaacgaaactttgttagagggcggagacacaccgcaatgccgcggcacgcagttttgcaacttcaccgcacagttttattttacgagtttttagcattttttccagcaaaatttgattatttgccagatttcctgataaaattaacgcgaaattgtagaaaagcagttaaaatacaaccgtgcggcagtgttgcgaattctaagggtttatttcgagtaataaatctgaaaaacctcttgctggagaagcttggcggccttttcaggcttcaaatcctcatggatttgatccaaatcct | |||
| Mapping_target | Y56A3A | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (20) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01271092 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00013236 | |||
| Transcript | Y56A3A.18.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y56A3A.18.1:c.127-146T>C | ||||
| Intron_number | 2/3 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
