WormBase Tree Display for Variation: WBVar00101344
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| WBVar00101344 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00101344 | |||
| Other_name | pas6203 | ||||
| cewivar00115752 | |||||
| R12H7.1a.2:c.-43+2362C>T | |||||
| HGVSg | CHROMOSOME_X:g.13204215C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_X | |
| Flanking_sequences | ctgttcctacaaaatgatatcacttgacatctctgtaagccagaatgcagctattttcagaaaggtttgatatcaaaagtatactgtaggcttttgctaggtaagttatgaagctgaaacgattttttcgttcagatcctcatatcaaatcttgggattaatgcttactgtatatgtcacattatttaaggatcatatgtaatttttgaattcagaaattctttgggtgttttttaaagattcactttttaacggctcaaactctctagaaacaaaccctatttcttgttgcccgtgctg | tttgaaaacaaattgtagtttgcatattttctattaagcacataaacttttgtgaaccttctttaaactgttgcatatgcaaacttttatattataaggatccctctttttttttaaattagctctattgctgttttctttcttttttttttcatctttacggtcccccgacgtgatctgttttccattgacgcgctttgtttttattcatttttcatctattcaattcttctttttacttttttcttcgccagctcggaactcattagttattctattcttctctttttcctgtgttaa | |||
| Mapping_target | CHROMOSOME_X | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (29) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01471964 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006749 | |||
| Transcript | R12H7.1a.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R12H7.1a.2:c.-43+2362C>T | ||||
| Intron_number | 1/10 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
