WormBase Tree Display for Variation: WBVar00099931
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| WBVar00099931 | Name | Public_name | WBVar00099931 | ||
|---|---|---|---|---|---|
| Other_name | pas4790 | ||||
| R04F11.4c.1:c.176+46T>G | |||||
| R04F11.4d.1:c.110+46T>G | |||||
| HGVSg | CHROMOSOME_V:g.12335777A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | R04F11 | |
| Flanking_sequences | agtcactcatgtgaaactaaattgatgatcaacataatatctaaaaataagttattattatagaatcaaaacaaaaatatcgataaaatgggtataaaaccgagaaaaagttccgccgacatataaatgtccggattaaattgtcaaaactctctcaaagttgagagagagagagagagacacgccgcggctcccgacccaaaaaattgttttctggttgttcgaagaaacggacacgaagtagtaaactgattattgaataagcgagacatcagttgacaacgaagagtcgtcagaaaa | ggacaagaacccgaaaaaaccgttggtaaaatgaaagaaacttactcatcaagatgtgttgacctagctgtgtgcatcgaattccggttcgaaaagtccgattcgcggtagctttgtggtagagatctgaaatttttttaaaatgaacttgaatgtttgaatttttggtttaaaagttgtattggcattaccttaaatgcactttcacatgctatgtcacatcattttttggttctgtgtcattctcgacatgctttttagcttttgaaaatttaaactaagtatttaacatttttgggg | |||
| Mapping_target | R04F11 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00006668 | |||
| Transcript | R04F11.4d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R04F11.4d.1:c.110+46T>G | ||||
| Intron_number | 2/12 | ||||
| R04F11.4c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R04F11.4c.1:c.176+46T>G | ||||
| Intron_number | 4/15 | ||||
| Method | WGS_Pasadena_Quinlan |
