WormBase Tree Display for Variation: WBVar00099133
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| WBVar00099133 | Name | Public_name | WBVar00099133 | ||
|---|---|---|---|---|---|
| Other_name | pas3992 | ||||
| cewivar00058497 | |||||
| K09F5.5.1:c.659+5G>A | |||||
| HGVSg | CHROMOSOME_X:g.7734460C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | K09F5 | |
| Flanking_sequences | gttttccaatccaacctctacatgctgcttccccacattgacatggttggtcactaaaattttaaaagttctgtaaagtataaaaaggtctagcataacaaaatcaaattgtgatttatttaaaattttgggattttttatcggggttcggaaaatggaagaaaaaagaaaaatacaaaagattttgataaattgttttattacagttcattgccagtatgtattttgtcgcaatgaaaaagtatactaaaaactcactccaaaaagatgggtattgttttcaaagtattacaaagtcaa | ttactttctgaaggaggttccatagtcaaaagtgatctcttctcctggttttatgactttcgatgcaaaaattcccagagacttcataggtctatccggcacggtccacacttttaccaaagcgtttggattgcaggaatgattgatgaaccgtgccgaattccctttgcgtgtcgggtccacatagtaatttcttcccacttcaaacgaataactgtgcttgattccatcttttttatagcgcttaacgcgtttattgtgctcggccttggttatcgcctctccccgatactcaaggat | |||
| Mapping_target | K09F5 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (21) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019584 | |||
| Transcript | K09F5.5.1 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | K09F5.5.1:c.659+5G>A | ||||
| Intron_number | 4/8 | ||||
| Method | WGS_Pasadena_Quinlan |
