WormBase Tree Display for Variation: WBVar00099065
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| WBVar00099065 | Name | Public_name | WBVar00099065 | ||
|---|---|---|---|---|---|
| Other_name | pas3924 | ||||
| cewivar00058166 | |||||
| K08A8.3c.1:c.138+346A>T | |||||
| K08A8.3a.1:c.1518+346A>T | |||||
| K08A8.3b.1:c.219+346A>T | |||||
| HGVSg | CHROMOSOME_X:g.7468749T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | K08A8 | |
| Flanking_sequences | acgtattaatgtcatgatagggggggagggtggataaagttcatagacattcatccaatcaatctttttggattagcatctagacgaggattataaaattataagaattttgatagaacttatttttatagaatgggctttgctacagaaaagtaatctttgagataaataaatttaattttgggggagggtgtaatttgaaacatcacaatttgtaaatttacgagaagagtaacggtccggaatatttcgaacgtagagacccaagatgtgcttacaactttcataaagaaacttttt | aaaattgttcacaaaatgttttatggaggttaaaaatatcgaaaaaaaaggcgtaaaagtgccttaatgaacaaaacaatgtgagataaattaccaaaatatgcactaaaagatcattattcaaaaaagtcaacgtgcccaaagttgaagattttagctaaaattaactcattttcgaaatttcgaaccgcctgaaaaatttataaacagagcggagtttcattgctcgtttacttgagaatatttcaatgaaatacgttcaaaaaacccaaaacagttactccttcttttagaattttc | |||
| Mapping_target | K08A8 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (26) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000591 | |||
| Transcript | K08A8.3a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K08A8.3a.1:c.1518+346A>T | ||||
| Intron_number | 8/10 | ||||
| K08A8.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K08A8.3c.1:c.138+346A>T | ||||
| Intron_number | 1/2 | ||||
| K08A8.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K08A8.3b.1:c.219+346A>T | ||||
| Intron_number | 2/3 | ||||
| Method | WGS_Pasadena_Quinlan |
