WormBase Tree Display for Variation: WBVar00098655
expand all nodes | collapse all nodes | view schema
| WBVar00098655 | Name | Public_name | WBVar00098655 | ||
|---|---|---|---|---|---|
| Other_name | pas3514 | ||||
| cewivar00073807 | |||||
| ZK973.6c.1:c.2910+599A>G | |||||
| ZK973.6a.1:c.2931+599A>G | |||||
| HGVSg | CHROMOSOME_I:g.4331148A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | ZK973 | |
| Flanking_sequences | tgcaaccacgtaaaaaaataagaggaacttttttctatttttccacacttgtttatttatctcttttcttcaaatctttcctgtcctctaaaaccatatgtctttgtcatcagctgctggttctattaactcgatcgaagtcgcctttgactcgctgtttttttgtgttgattcatttcgtctcttgttcaacccattgaaattctttggtcttctttattggttttaaaaacgaaaaatggaaactttcaaaatagaattgaaagaattccaaccgtttccgctaatctgatctccccg | tcggacaaccaaaaattagtggctacgtgtgcgttctcgctagcaatcgaagtttcgttcatgaataagtcggctgcaatacaaaattgaaaaaggaataccttgtcaaggttggcttctctgcaatattcttctaggtttgccaaaaacgtatttttcgagtattttctaaaaaattgaccgaatattggaaaatggaagttcttaaatttagtaggtctattggcatcttgtaattacatgattggacctttcaaaatttctttagctgaaacaatgaaacaatttttcgatgtagct | |||
| Mapping_target | ZK973 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (48) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01431351 | |||
| WBVar01281863 | |||||
| WBVar01343559 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000140 | |||
| Transcript | ZK973.6c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK973.6c.1:c.2910+599A>G | ||||
| Intron_number | 11/29 | ||||
| ZK973.6a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK973.6a.1:c.2931+599A>G | ||||
| Intron_number | 11/30 | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
